STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK70057.1Identified by match to protein family HMM PF01590. (428 aa)    
Predicted Functional Partners:
ABK70064.1
Adenylate and Guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211.
  
    0.748
ABK74067.1
Lipoprotein; Identified by match to protein family HMM PF03713.
       0.688
ABK73998.1
Alcohol dehydrogenase, zinc-containing; Identified by match to protein family HMM PF00107.
 
  
 0.675
ABK74287.1
Flavin-containing monooxygenase FMO; Identified by match to protein family HMM PF07992.
 
     0.675
ABK70596.1
Acetoin(diacetyl) reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM TIGR02415; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.669
ABK72888.1
Conserved domain protein; Identified by match to protein family HMM PF00403.
       0.558
ABK70195.1
Secreted protein.
       0.545
ABK71068.1
Copper-translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.
       0.522
ABK70917.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05610.
 
     0.451
ABK74518.1
Identified by match to protein family HMM PF07905.
  
    0.449
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.