Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
ABK74287.1Flavin-containing monooxygenase FMO; Identified by match to protein family HMM PF07992. (613 aa)    
Predicted Functional Partners:
ABK73998.1
Alcohol dehydrogenase, zinc-containing; Identified by match to protein family HMM PF00107.
  
 
 0.821
ABK70057.1
Identified by match to protein family HMM PF01590.
 
     0.675
ABK76105.1
T/U mismatch-specific DNA glycosylase.
       0.662
ABK70596.1
Acetoin(diacetyl) reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM TIGR02415; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.660
ABK73299.1
Chitooligosaccharide deacetylase; Identified by match to protein family HMM PF01522.
       0.657
ABK72097.1
D-aminoacylase; Identified by match to protein family HMM PF07908; match to protein family HMM PF07969.
     
 0.544
ABK73678.1
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.540
ABK71663.1
Fe uptake system permease; Identified by match to protein family HMM PF00005.
      
 0.540
ABK74649.1
Hydroxyquinol 1,2-dioxygenase; Identified by match to protein family HMM PF00775; match to protein family HMM PF04444.
 
  
 0.530
ABK75118.1
Hydroxyquinol 1,2-dioxygenase; Identified by match to protein family HMM PF00775; match to protein family HMM PF04444.
 
  
 0.518
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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