Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK74162.1Identified by match to protein family HMM PF04954; match to protein family HMM PF08021. (225 aa)    
Predicted Functional Partners:
ABK70627.1
2,3-dihydroxybenzoate-AMP ligase; Identified by match to protein family HMM PF00501.
 
  
 0.914
ABK75067.1
ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
  
 0.885
ABK71448.1
ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.
  
 0.880
ABK75414.1
Anthranilate synthase component I; Identified by match to protein family HMM PF00425.
  
  
 0.864
ABK73576.1
L-ornithine 5-monooxygenase.
  
  
 0.823
ABK75882.1
acyl-CoA synthase; Identified by match to protein family HMM PF00501.
  
  
 0.802
ABK72739.1
FAD-binding 9, siderophore-interacting; Identified by match to protein family HMM PF04954; match to protein family HMM PF08021.
 
    0.793
ABK72168.1
Cobalt transport protein CbiM.
      
 0.788
ABK70771.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
   
  
 0.784
cbiM
Cobalamin biosynthesis protein CbiM; Identified by match to protein family HMM PF01891.
   
  
 0.767
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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