Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK72395.1Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. (195 aa)    
Predicted Functional Partners:
ABK72693.1
Putative cytochrome P450 123; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family.
 
    0.904
ABK72321.1
Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440.
      
 0.824
ABK75048.1
Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440.
      
 0.824
pcaC-4
4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627.
 
    0.611
ABK70397.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
     0.588
ABK73580.1
Putative transcriptional regulator; Identified by match to protein family HMM PF00440; match to protein family HMM PF02796.
  
     0.585
ABK76052.1
Identified by match to protein family HMM TIGR01409.
 
     0.562
ABK73925.1
Steroid delta-isomerase; Identified by match to protein family HMM PF02136.
  
   
 0.561
ABK70031.1
Identified by match to protein family HMM PF01694.
       0.522
ABK74551.1
Conserved domain protein.
      
 0.511
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.