Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK75230.1ABC transporter, ATP-binding protein SugC; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. (406 aa)    
Predicted Functional Partners:
ABK75996.1
ABC transporter, permease protein SugB; Identified by match to protein family HMM PF00528.
 
 0.999
ABK73348.1
ABC transporter, permease protein SugA; Identified by match to protein family HMM PF00528.
 
 0.999
ABK72480.1
Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547.
 
 0.999
ABK71369.1
Sugar ABC transporter permease protein; Identified by match to protein family HMM PF00528.
 
 0.983
ABK74801.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 0.978
ABK70489.1
Probable sugar ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 0.974
ABK75908.1
ABC transporter, ATPase subunit; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
  
  
 
0.970
ABK70962.1
Probable sugar ABC transporter, substrate-binding protein, putative; Identified by match to protein family HMM PF01547.
  
 0.956
ABK75168.1
Sugar ABC transporter permease protein; Identified by match to protein family HMM PF00528.
 
 0.954
ABK74128.1
Sugar transport system; Identified by match to protein family HMM PF00528.
 
 0.943
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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