Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABK72480.1Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. (465 aa)    
Predicted Functional Partners:
ABK75230.1
ABC transporter, ATP-binding protein SugC; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
 
 0.999
ABK75996.1
ABC transporter, permease protein SugB; Identified by match to protein family HMM PF00528.
 
 0.999
ABK73348.1
ABC transporter, permease protein SugA; Identified by match to protein family HMM PF00528.
 
 0.998
ABK74128.1
Sugar transport system; Identified by match to protein family HMM PF00528.
 
 0.965
ABK72330.1
ABC transporter permease protein; Identified by match to protein family HMM PF00528.
 
 
 0.953
ugpC
ABC transporter, nucleotide binding/ATPase protein, sn-Glycerol-3-phosphate; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 0.918
ABK73313.1
ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
 
 0.917
ABK73052.1
Glycerol-phosphate porter; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; Belongs to the ABC transporter superfamily.
 
 0.914
ABK71632.1
ABC transporter, nucleotide binding/ATPase protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
  
 0.903
ABK75908.1
ABC transporter, ATPase subunit; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
  
 0.903
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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