Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK75359.1malyl-CoA lyase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family. (318 aa)    
Predicted Functional Partners:
ABK71938.1
HpcH/HpaI aldolase/citrate lyase family protein; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
 
  
0.958
ABK69611.1
HpcH/HpaI aldolase/citrate lyase family protein, putative; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
  
  
 
0.952
ABK73940.1
3-hydroxy-3-methylglutaryl-CoA lyase; Identified by match to protein family HMM PF00682.
     
 0.847
ABK72215.1
Fumarate hydratase class I, anaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.762
mdcC
Malonate decarboxylase acyl carrier protein; Identified by match to protein family HMM PF06857; match to protein family HMM TIGR03130.
  
 
 0.702
ABK76139.1
Pyruvate synthase; Identified by match to protein family HMM PF01855.
  
 
 0.701
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.694
ABK74157.1
MaoC like domain protein; Identified by match to protein family HMM PF01575.
  
 
 0.680
purD
Phosphoribosylamine--glycine ligase; Identified by match to protein family HMM PF01071; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR00877; Belongs to the GARS family.
     
 0.669
mdcB
triphosphoribosyl-dephospho-CoA synthase MdcB; Identified by match to protein family HMM PF01874; match to protein family HMM TIGR03132.
 
  
 0.667
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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