STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK73545.1Conserved hypothetical protein. (127 aa)    
Predicted Functional Partners:
tag
DNA-3-methyladenine glycosylase I; Identified by match to protein family HMM PF03352; match to protein family HMM TIGR00624.
  
  
 0.817
ABK72696.1
Conserved hypothetical protein.
  
   
 0.781
rseA
Conserved hypothetical protein; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor SigE. ECF sigma factors are held in an inactive form by an anti-sigma factor (By similarity); Belongs to the zinc-associated anti-sigma factor (ZAS) superfamily.
  
  
 0.773
ABK69690.1
Conserved hypothetical protein.
  
     0.771
ABK69890.1
Conserved hypothetical protein.
  
     0.770
ABK74620.1
Conserved hypothetical protein.
  
     0.770
ABK71106.1
35 kDa protein; Identified by match to protein family HMM PF04012.
  
  
 0.767
ABK73146.1
Putative secreted alanine rich protein.
  
     0.767
ABK74693.1
Conserved hypothetical protein.
  
     0.765
ABK73241.1
Conserved hypothetical protein.
 
     0.764
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.