Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK70758.1HTH-type transcriptional regulator DegA; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. (353 aa)    
Predicted Functional Partners:
ABK70781.1
Xylosidase/arabinosidase; Identified by match to protein family HMM PF00933; match to protein family HMM PF01915; Belongs to the glycosyl hydrolase 3 family.
 
 
 0.891
ABK71329.1
Identified by match to protein family HMM PF00232.
    
 0.781
ABK75431.1
Nitrate/nitrite transporter protein; Identified by match to protein family HMM PF07690.
     
 0.721
ABK74411.1
Multiphosphoryl transfer protein (MTP); Identified by match to protein family HMM PF00381; match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF03610; match to protein family HMM PF05524; match to protein family HMM TIGR01003; match to protein family HMM TIGR01417; match to protein family HMM TIGR02364; Belongs to the PEP-utilizing enzyme family.
   
 
 0.716
narH
Nitrate reductase, beta subunit; Identified by match to protein family HMM TIGR01660.
  
  
 0.657
ABK70099.1
Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
   
 
 0.656
ABK70243.1
Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
   
 
 0.656
narI
Respiratory nitrate reductase, gamma subunit; Identified by match to protein family HMM PF02665; match to protein family HMM TIGR00351.
     
 0.652
ABK75176.1
Nitrate reductase, alpha subunit; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01580; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.643
narJ
Nitrate reductase molybdenum cofactor assembly chaperone; Identified by match to protein family HMM PF02613; match to protein family HMM TIGR00684.
       0.635
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.