STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK70323.1Cinnamoyl ester hydrolase; Identified by match to protein family HMM PF01638. (130 aa)    
Predicted Functional Partners:
ABK75925.1
Pentachlorophenol 4-monooxygenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494.
     
 0.827
ABK71088.1
6-hydroxy-D-nicotine oxidase; Identified by match to protein family HMM PF01565.
      
 0.824
ABK73067.1
Putative transcriptional regulator; Identified by match to protein family HMM PF01638.
  
     0.772
ABK73936.1
Putative transcriptional regulator family protein; Identified by match to protein family HMM PF01638.
  
     0.695
ABK71125.1
Identified by match to protein family HMM PF01638.
  
     0.684
ABK71432.1
Conserved hypothetical protein.
   
    0.620
ABK74038.1
Transcriptional regulatory protein; Identified by match to protein family HMM PF01638.
  
     0.610
ABK73800.1
Putative transcriptional regulator family protein; Identified by match to protein family HMM PF01638.
  
     0.608
ABK74936.1
ABC proline/glycine betaine family protein transporter, periplasmic ligand binding protein; Identified by match to protein family HMM PF04069.
       0.547
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
      
 0.494
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.