Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ABK72354.1Siderophore binding protein; Identified by match to protein family HMM PF00132. (173 aa)    
Predicted Functional Partners:
cynT
Carbonic anhydrase; Catalyzes the reversible hydration of carbon dioxide to form bicarbonate; Belongs to the beta-class carbonic anhydrase family.
 
 
 0.897
ABK74393.1
Carbonic anhydrase; Identified by match to protein family HMM PF00484.
   
 0.880
ABK71216.1
Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165; match to protein family HMM PF01965.
       0.690
ABK74513.1
Fasciclin domain protein; Identified by match to protein family HMM PF02469.
     
 0.647
pheT
phenylalanyl-tRNA synthetase, beta subunit; Identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.550
ABK72045.1
Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943.
     
 0.549
ABK70019.1
Peptidase M22, glycoprotease; Identified by match to protein family HMM PF00814.
     
 0.536
ABK75863.1
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Identified by match to protein family HMM PF00578.
  
  
 0.526
ABK74683.1
Integral membrane protein; Identified by match to protein family HMM PF07690.
       0.515
ABK74260.1
Immunogenic protein MPT63.
      
 0.497
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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