Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK74177.1Identified by match to protein family HMM PF00440. (200 aa)    
Predicted Functional Partners:
ABK73597.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF07993.
 
     0.702
ABK75281.1
Cupin domain protein; Identified by match to protein family HMM PF07883.
 
  
 0.574
ABK71756.1
Cupin domain protein; Identified by match to protein family HMM PF07883.
 
  
 0.571
ABK74152.1
DoxX subfamily protein, putative; Identified by match to protein family HMM PF07681.
  
    0.542
ABK70259.1
Cupin domain protein; Identified by match to protein family HMM PF07883.
 
  
 0.494
ABK69865.1
Metal-dependent phosphohydrolase; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277.
  
     0.494
ABK70408.1
Transcriptional regulator; Identified by match to protein family HMM PF00440.
  
     0.469
ABK74494.1
Conserved membrane protein.
       0.465
ABK70090.1
MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047.
  
   
 0.444
ABK72751.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.415
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (24%) [HD]