ABK70486.1 protein (Mycolicibacterium smegmatis)

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ABK70486.1

RmlD substrate binding domain superfamily protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993. (359 aa)

Predicted Functional Partners:

ABK72478.1

0.878

ABK71566.1

0.853

ABK71682.1

0.823

ABK75676.1

0.792

rpsC

0.745

rpsS

0.740

rpsQ

0.735

rpsL

0.707

rpsE

0.686

rpsB

0.681

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK70486.1	ABK71566.1	MSMEG_5233	MSMEG_5228	RmlD substrate binding domain superfamily protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	3-beta hydroxysteroid dehydrogenase/isomerase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	0.853
ABK70486.1	ABK71682.1	MSMEG_5233	MSMEG_5235	RmlD substrate binding domain superfamily protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	Short chain dehydrogenase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.823
ABK70486.1	ABK72478.1	MSMEG_5233	MSMEG_5234	RmlD substrate binding domain superfamily protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.	0.878
ABK70486.1	ABK75676.1	MSMEG_5233	MSMEG_1604	RmlD substrate binding domain superfamily protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	FAD dependent oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01266.	0.792
ABK70486.1	rpsB	MSMEG_5233	MSMEG_2519	RmlD substrate binding domain superfamily protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family.	0.681
ABK70486.1	rpsC	MSMEG_5233	MSMEG_1442	RmlD substrate binding domain superfamily protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.745
ABK70486.1	rpsE	MSMEG_5233	MSMEG_1472	RmlD substrate binding domain superfamily protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.	0.686
ABK70486.1	rpsL	MSMEG_5233	MSMEG_1398	RmlD substrate binding domain superfamily protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.707
ABK70486.1	rpsQ	MSMEG_5233	MSMEG_1445	RmlD substrate binding domain superfamily protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.735
ABK70486.1	rpsS	MSMEG_5233	MSMEG_1440	RmlD substrate binding domain superfamily protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.740
ABK71566.1	ABK70486.1	MSMEG_5228	MSMEG_5233	3-beta hydroxysteroid dehydrogenase/isomerase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	RmlD substrate binding domain superfamily protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	0.853
ABK71566.1	ABK75676.1	MSMEG_5228	MSMEG_1604	3-beta hydroxysteroid dehydrogenase/isomerase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	FAD dependent oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01266.	0.997
ABK71566.1	rpsB	MSMEG_5228	MSMEG_2519	3-beta hydroxysteroid dehydrogenase/isomerase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family.	0.681
ABK71566.1	rpsC	MSMEG_5228	MSMEG_1442	3-beta hydroxysteroid dehydrogenase/isomerase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.745
ABK71566.1	rpsE	MSMEG_5228	MSMEG_1472	3-beta hydroxysteroid dehydrogenase/isomerase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.	0.686
ABK71566.1	rpsL	MSMEG_5228	MSMEG_1398	3-beta hydroxysteroid dehydrogenase/isomerase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.710
ABK71566.1	rpsQ	MSMEG_5228	MSMEG_1445	3-beta hydroxysteroid dehydrogenase/isomerase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.735
ABK71566.1	rpsS	MSMEG_5228	MSMEG_1440	3-beta hydroxysteroid dehydrogenase/isomerase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.740
ABK71682.1	ABK70486.1	MSMEG_5235	MSMEG_5233	Short chain dehydrogenase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	RmlD substrate binding domain superfamily protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	0.823
ABK71682.1	ABK72478.1	MSMEG_5235	MSMEG_5234	Short chain dehydrogenase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.	0.871

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