STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74559.1Conserved hypothetical protein. (337 aa)    
Predicted Functional Partners:
ABK72177.1
Dolichyl-phosphate-mannose-protein mannosyltransferase; Identified by match to protein family HMM PF02366.
       0.607
ABK74758.1
Conserved hypothetical protein.
  
     0.470
ABK74735.1
Conserved hypothetical protein.
  
    0.435
rsmI
Conserved hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
    0.433
ABK71591.1
Periplasmic binding protein; Identified by match to protein family HMM PF01497.
  
    0.423
ABK71094.1
Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089.
  
    0.419
ABK71602.1
Conserved hypothetical protein.
  
    0.408
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.