node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK73063.1 | cspA | MSMEG_6158 | MSMEG_6159 | Conserved hypothetical protein. | Conserved domain protein; Identified by match to protein family HMM PF00313. | 0.920 |
cspA | ABK73063.1 | MSMEG_6159 | MSMEG_6158 | Conserved domain protein; Identified by match to protein family HMM PF00313. | Conserved hypothetical protein. | 0.920 |
cspA | rplA | MSMEG_6159 | MSMEG_1347 | Conserved domain protein; Identified by match to protein family HMM PF00313. | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.655 |
cspA | rplO | MSMEG_6159 | MSMEG_1474 | Conserved domain protein; Identified by match to protein family HMM PF00313. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.672 |
cspA | rpmJ | MSMEG_6159 | MSMEG_1520 | Conserved domain protein; Identified by match to protein family HMM PF00313. | Ribosomal protein L36; Identified by match to protein family HMM PF00444; match to protein family HMM TIGR01022; Belongs to the bacterial ribosomal protein bL36 family. | 0.694 |
cspA | rpoA | MSMEG_6159 | MSMEG_1524 | Conserved domain protein; Identified by match to protein family HMM PF00313. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.675 |
cspA | rpoB | MSMEG_6159 | MSMEG_1367 | Conserved domain protein; Identified by match to protein family HMM PF00313. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. This subunit often mutates to generate rifampicin (Rif) resistance. Interaction with RbpA partially restores Rif-inhibited transcription; once the subunit is Rif-resistant however RbpA no longer stimulates transcription. | 0.686 |
cspA | rpoZ | MSMEG_6159 | MSMEG_3053 | Conserved domain protein; Identified by match to protein family HMM PF00313. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.684 |
cspA | rpsL | MSMEG_6159 | MSMEG_1398 | Conserved domain protein; Identified by match to protein family HMM PF00313. | Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.695 |
cspA | rpsO | MSMEG_6159 | MSMEG_2654 | Conserved domain protein; Identified by match to protein family HMM PF00313. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.676 |
cspA | tuf | MSMEG_6159 | MSMEG_1401 | Conserved domain protein; Identified by match to protein family HMM PF00313. | Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.705 |
rplA | cspA | MSMEG_1347 | MSMEG_6159 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Conserved domain protein; Identified by match to protein family HMM PF00313. | 0.655 |
rplA | rplO | MSMEG_1347 | MSMEG_1474 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.997 |
rplA | rpmJ | MSMEG_1347 | MSMEG_1520 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L36; Identified by match to protein family HMM PF00444; match to protein family HMM TIGR01022; Belongs to the bacterial ribosomal protein bL36 family. | 0.989 |
rplA | rpoA | MSMEG_1347 | MSMEG_1524 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.948 |
rplA | rpoB | MSMEG_1347 | MSMEG_1367 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. This subunit often mutates to generate rifampicin (Rif) resistance. Interaction with RbpA partially restores Rif-inhibited transcription; once the subunit is Rif-resistant however RbpA no longer stimulates transcription. | 0.947 |
rplA | rpoZ | MSMEG_1347 | MSMEG_3053 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.700 |
rplA | rpsL | MSMEG_1347 | MSMEG_1398 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.991 |
rplA | rpsO | MSMEG_1347 | MSMEG_2654 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.993 |
rplA | tuf | MSMEG_1347 | MSMEG_1401 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.993 |