close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0004Hypothetical protein; Identified by Glimmer2; putative. (203 aa)    
Predicted Functional Partners:
MXAN_0005
Putative membrane protein.
      0.827
MXAN_0003
CBS domain protein; Identified by match to protein family HMM PF00571.
      0.761
MXAN_7321
Transcriptional regulator, AfsR/DnrI/RedD family; Identified by match to protein family HMM PF03704.
  
     0.591
MXAN_1978
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.553
MXAN_1270
Putative membrane protein.
  
     0.550
MXAN_3497
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.531
MXAN_4155
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.491
MXAN_5755
Identified by match to protein family HMM TIGR01352.
  
    0.450
MXAN_6668
Conserved hypothetical protein; Identified by match to protein family HMM TIGR02271.
 
     0.438
MXAN_2706
Conserved hypothetical protein; Identified by similarity to GB:AAS70461.1; match to protein family HMM PF00561.
  
     0.433
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.