Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pkn13Serine/threonine kinase PKN13; Identified by similarity to SP:P54738; match to protein family HMM PF00069. (935 aa)    
Predicted Functional Partners:
MXAN_4398
Protein phosphatase/cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027; match to protein family HMM PF00481.
 
   0.788
MXAN_5349
Serine/threonine protein phosphatase, 2C family; Identified by similarity to GB:AAF81068.1; match to protein family HMM PF00481.
  
   0.783
pph1
Protein phosphatase 1; Identified by similarity to GB:AAF81068.1; match to protein family HMM PF00481.
  
   0.782
MXAN_1412
Putative serine/threonine protein phosphatase; Identified by similarity to GB:AAF81068.1; match to protein family HMM PF00481.
  
   0.775
MXAN_7269
Putative serine/threonine protein kinase; Identified by match to protein family HMM PF00069.
  
     0.775
MXAN_0022
Putative lipoprotein.
       0.603
MXAN_0021
Hypothetical protein; Identified by Glimmer2; putative.
       0.485
MXAN_1361
FHA domain protein; Identified by match to protein family HMM PF00498.
  
 
   0.477
MXAN_2464
FHA domain protein; Identified by match to protein family HMM PF00498.
  
 
   0.474
MXAN_5591
FHA domain/tetratricopeptide repeat protein; Identified by match to protein family HMM PF00498; match to protein family HMM PF07719.
  
 
   0.463
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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