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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0036Putative aliphatic sulfonates ABC transporter, permease protein; Identified by similarity to PIR:B96913; match to protein family HMM PF00528. (253 aa)    
Predicted Functional Partners:
MXAN_0037
Putative aliphatic sulfonates ABC transporter, ATP-binding protein; Identified by similarity to GB:BAD39859.1; match to protein family HMM PF00005.
  
 0.985
MXAN_0035
ABC transporter, substrate-binding protein, aliphatic sulfonates family; Identified by match to protein family HMM PF03180; match to protein family HMM TIGR01728.
  
 0.971
MXAN_2833
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
 0.888
MXAN_2831
Putative lipoprotein; Identified by similarity to GB:AAK24600.1.
 
  
 0.684
MXAN_5702
Conserved hypothetical protein; Identified by similarity to GB:BAB48671.1.
  
  
 0.628
MXAN_0038
Hypothetical protein; Identified by Glimmer2; putative.
       0.508
MXAN_0034
Hydrolase, haloacid dehalogenase-like family; Identified by match to protein family HMM PF00702.
       0.442
MXAN_3779
Non-ribosomal peptide synthetase/polyketide synthase; Identified by similarity to GB:AAF15891.2; match to protein family HMM PF00109; match to protein family HMM PF00296; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801; match to protein family HMM TIGR01733.
  
  
 0.433
MXAN_3634
Non-ribosomal peptide synthase; Identified by match to protein family HMM PF00296; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733.
  
  
 0.429
MXAN_4532
Non-ribosomal peptide synthase; Identified by similarity to PIR:T18551; match to protein family HMM PF00296; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733.
  
  
 0.429
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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