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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0071Conserved hypothetical protein. (254 aa)    
Predicted Functional Partners:
MXAN_0241
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.584
MXAN_2847
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.517
MXAN_6735
Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF01590; match to protein family HMM PF02518.
  
     0.513
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.505
MXAN_0072
Identified by match to protein family HMM PF03061.
       0.499
MXAN_0073
Identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369.
       0.499
MXAN_0712
Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF01590; match to protein family HMM PF02518.
  
     0.499
MXAN_1770
LppY/LpqO family protein; Identified by similarity to GB:BAC53332.1; match to protein family HMM PF07485.
  
     0.473
MXAN_4249
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.464
MXAN_6668
Conserved hypothetical protein; Identified by match to protein family HMM TIGR02271.
 
    0.458
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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