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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0138Conserved hypothetical protein; Identified by similarity to PIR:E98192; match to protein family HMM PF00732; match to protein family HMM PF01266. (507 aa)    
Predicted Functional Partners:
MXAN_1341
Conserved hypothetical protein; Identified by similarity to PIR:G83362.
 
 
 0.765
MXAN_0137
Hypothetical protein; Identified by Glimmer2; putative.
       0.639
MXAN_3821
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.572
MXAN_0139
Conserved hypothetical protein; Identified by similarity to SP:Q8ZN39.
       0.523
MXAN_1611
Cytochrome c family protein.
 
 
   0.510
MXAN_1648
Conserved hypothetical protein; Identified by similarity to GB:CAD94776.1.
  
     0.443
MXAN_3822
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.432
MXAN_6550
Glycosyl hydrolase, family 15; Identified by match to protein family HMM PF00722.
  
    0.432
otsAB
Alpha,alpha-trehalose-phosphate synthase/trehalose-phosphatase; Identified by match to protein family HMM PF00982; match to protein family HMM PF02358; match to protein family HMM TIGR00685; match to protein family HMM TIGR01484.
  
  
 0.431
MXAN_2839
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
     0.429
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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