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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0142WD domain G-beta repeat/PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF00400; match to protein family HMM PF02985; match to protein family HMM PF03130. (2179 aa)    
Predicted Functional Partners:
MXAN_0141
SWIM zinc finger domain protein; Identified by match to protein family HMM PF04434.
 
     0.946
MXAN_0525
Putative serine/threonine protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF03781.
 
    0.793
MXAN_0906
Putative serine/threonine protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF03781.
 
    0.785
MXAN_0267
Metallophosphoesterase; Identified by match to protein family HMM PF00149.
 
     0.781
MXAN_3638
Peptidase, M19 family; Identified by match to protein family HMM PF01244.
  
   0.780
MXAN_2299
Putative lipoprotein.
  
     0.774
MXAN_5849
WGR domain protein; Identified by match to protein family HMM PF05406.
 
     0.774
MXAN_0805
Peptidase, M10A/M12A subfamilies; Identified by match to protein family HMM PF00413; match to protein family HMM PF04151.
  
     0.758
MXAN_3133
Putative membrane protein.
  
     0.747
MXAN_1591
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.745
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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