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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0178Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. (203 aa)    
Predicted Functional Partners:
moaDE
Molybdopterin converting factor, subunits 1/2; Identified by match to protein family HMM PF02391; match to protein family HMM PF02597; match to protein family HMM TIGR01682.
    
 0.935
MXAN_2983
Putative cysteine desulfurase; Identified by similarity to SP:P05341; match to protein family HMM PF00266; match to protein family HMM PF01212.
   
 0.917
iscS
Putative cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
   
 0.917
MXAN_4067
Identified by match to protein family HMM PF02597.
    
 0.908
MXAN_4069
ThiFdomain/MoeZ/MoeB domain protein; Identified by match to protein family HMM PF00899; match to protein family HMM PF05237.
    
 0.905
MXAN_1499
ThiF domain protein; Identified by match to protein family HMM PF00899.
    
 0.904
MXAN_4066
Conserved hypothetical protein; Identified by similarity to GB:AAK25688.1.
    
 0.904
MXAN_0177
Identified by match to protein family HMM PF01925.
 
  
 0.816
MXAN_0179
Identified by match to protein family HMM PF00753.
 
 
 0.802
MXAN_4314
Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.
  
     0.762
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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