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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0191Fatty acid hydroxylase; Identified by match to protein family HMM PF04116. (252 aa)    
Predicted Functional Partners:
MXAN_5864
Putative membrane protein.
  
 
 0.560
MXAN_3747
Conserved hypothetical protein; Identified by similarity to GB:CAD78445.1.
 
     0.540
MXAN_3932
Polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00975; match to protein family HMM PF02801.
  
 
 0.517
MXAN_0189
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.512
MXAN_0190
Conserved hypothetical protein; Identified by similarity to GB:CAD71733.1; match to protein family HMM PF03965.
       0.511
MXAN_0570
Identified by match to protein family HMM PF00565.
   
    0.452
MXAN_0277
Putative membrane protein.
  
     0.439
recX-2
Conserved hypothetical protein; Modulates RecA activity; Belongs to the RecX family.
  
     0.430
MXAN_3746
Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993.
  
 
 0.420
MXAN_3927
Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293.
  
  
 0.410
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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