STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0209Hypothetical protein; Identified by Glimmer2; putative. (298 aa)    
Predicted Functional Partners:
MXAN_0106
FG-GAP repeat domain protein; Identified by match to protein family HMM PF01839.
  
    0.743
MXAN_1744
Identified by match to protein family HMM PF00305; match to protein family HMM PF01477.
  
     0.726
MXAN_6411
Putative protein-arginine deiminase; Identified by match to protein family HMM PF03068.
 
     0.709
MXAN_6835
Putative deoxyribonuclease I-like protein; Identified by similarity to GB:BAA88714.1; match to protein family HMM PF03372.
  
    0.659
MXAN_2459
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
  
     0.642
MXAN_1334
Thrombospondin type 3 repeat family protein; Identified by match to protein family HMM PF02412.
  
     0.638
MXAN_5679
Putative heme oxygenase; Identified by match to protein family HMM PF01126.
  
     0.627
MXAN_0210
Transglycosylase SLT domain protein; Identified by match to protein family HMM PF01464; match to protein family HMM PF07721.
       0.559
MXAN_4937
EGF domain protein; Identified by match to protein family HMM PF00008; match to protein family HMM PF07645; match to protein family HMM TIGR02232.
  
     0.558
MXAN_3623
Putative glutathione S-transferase; Identified by similarity to SP:P04903; match to protein family HMM PF00043; match to protein family HMM PF02798.
  
     0.557
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.