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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0270Conserved hypothetical protein; Identified by similarity to PIR:G75281. (258 aa)    
Predicted Functional Partners:
MXAN_0269
Oxidoreductase, zinc-binding dehydrogenase family; Identified by similarity to SP:P47734; match to protein family HMM PF00107.
 
    0.945
MXAN_6323
Oxidoreductase, zinc-binding dehydrogenase family; Identified by match to protein family HMM PF00107.
 
    0.712
MXAN_1270
Putative membrane protein.
  
     0.605
MXAN_6668
Conserved hypothetical protein; Identified by match to protein family HMM TIGR02271.
  
  
 0.589
MXAN_1555
Cation-binding protein, hemerythrin HHE family; Identified by match to protein family HMM PF01814.
  
    0.571
MXAN_6688
Cyclic nucleotide binding/ATPase domain protein; Identified by match to protein family HMM PF00027; match to protein family HMM PF02518.
  
    0.554
treY
Maltooligosyltrehalose synthase; Identified by similarity to SP:Q44315; match to protein family HMM TIGR02401.
  
    0.490
MXAN_2775
PDZ domain protein; Identified by match to protein family HMM PF00595.
  
     0.473
MXAN_5309
Conserved hypothetical protein; Identified by similarity to PIR:AG1918; match to protein family HMM PF07883.
  
     0.464
MXAN_0071
Conserved hypothetical protein.
  
    0.443
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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