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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0271Putative lipoprotein; Identified by similarity to GB:AAM97330.1. (459 aa)    
Predicted Functional Partners:
MXAN_0272
TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
   
 0.951
tonB
Ferric siderophore transporter, periplasmic energy transduction protein TonB; Identified by similarity to GB:AAF04082.1; match to protein family HMM PF03544; match to protein family HMM TIGR01352.
 
     0.561
MXAN_0821
Identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01352.
 
     0.552
MXAN_3638
Peptidase, M19 family; Identified by match to protein family HMM PF01244.
  
     0.545
MXAN_0273
tonB system transport protein, ExbD/TolR family; Identified by similarity to SP:P05829; match to protein family HMM PF02472.
       0.528
MXAN_0275
tonB system transport protein ExbB/TolQ; Identified by similarity to SP:P18783; match to protein family HMM PF01618.
       0.524
MXAN_0274
Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.
       0.522
MXAN_0856
Identified by match to protein family HMM PF00593; match to protein family HMM PF03544; match to protein family HMM PF07715; match to protein family HMM TIGR01352.
 
     0.518
MXAN_6997
tonB domain protein; Identified by match to protein family HMM PF07715; match to protein family HMM TIGR01352.
 
     0.518
MXAN_3374
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF07719.
  
 
 0.474
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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