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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0275tonB system transport protein ExbB/TolQ; Identified by similarity to SP:P18783; match to protein family HMM PF01618. (250 aa)    
Predicted Functional Partners:
MXAN_0274
Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.
 
 
 0.974
MXAN_0273
tonB system transport protein, ExbD/TolR family; Identified by similarity to SP:P05829; match to protein family HMM PF02472.
 
 
 0.951
MXAN_6484
Transport energizing protein, ExbD/TolR family; Identified by similarity to SP:Q9ZHV9; match to protein family HMM PF02472.
 
 
 0.901
MXAN_0819
Transport energizing protein, ExbD/TolR family; Identified by similarity to SP:Q9ZHV9; match to protein family HMM PF02472.
 
 
 0.900
tolR
Transport energizing protein TolR; Also known as adventurous gliding motility protein AglV; identified by match to protein family HMM PF02472; match to protein family HMM TIGR02801.
 
 
 0.900
MXAN_1447
Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.
 
 
 0.896
MXAN_1446
Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.
 
 
 0.877
MXAN_4670
Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.
 
 
 0.871
tonB
Ferric siderophore transporter, periplasmic energy transduction protein TonB; Identified by similarity to GB:AAF04082.1; match to protein family HMM PF03544; match to protein family HMM TIGR01352.
 
 
 0.855
MXAN_1449
Putative TonB protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.745
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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