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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0364Hypothetical protein; Identified by Glimmer2; putative. (266 aa)    
Predicted Functional Partners:
MXAN_0360
Type 4 pilus biogenesis operon protein; Identified by match to protein family HMM TIGR02532.
  
  
 0.939
MXAN_0362
Putative pilus biogenesis operon protein.
  
  
 0.936
MXAN_0361
Type 4 pilus biogenesis operon protein; Identified by match to protein family HMM TIGR02532.
  
  
 0.870
MXAN_0363
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.848
MXAN_0359
Type 4 pilus biogenesis operon protein; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532.
     
 0.787
MXAN_1019
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.671
MXAN_1018
Prepilin-type N-terminal cleavage/methylation domain protein; Proteins containing this domain include type 4 pilus biogenesis components, competence proteins, and type II secretion system proteins; identified by match to protein family HMM TIGR02532.
  
  
 0.593
MXAN_1367
Prepilin-type N-terminal cleavage/methylation domain protein; Proteins containing this domain include type 4 pilus biogenesis components, competence proteins, and type II secretion system proteins; identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532.
  
  
 0.593
MXAN_0723
Putative lipoprotein.
  
  
 0.580
MXAN_1020
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.580
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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