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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0387Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165. (284 aa)    
Predicted Functional Partners:
MXAN_1619
Conserved hypothetical protein; Identified by similarity to GB:AAN30633.1; match to protein family HMM PF08220.
  
     0.610
MXAN_0386
Identified by match to protein family HMM PF00903.
 
     0.600
MXAN_4992
Putative transcriptional regulator; Identified by match to protein family HMM PF08220.
  
     0.584
MXAN_3658
Conserved hypothetical protein; Identified by similarity to GB:CAE29453.1; match to protein family HMM PF08220.
  
    0.551
MXAN_2553
Conserved hypothetical protein; Identified by similarity to GB:CAE27706.1; match to protein family HMM PF08220.
  
     0.548
MXAN_6252
Identified by match to protein family HMM PF00903.
 
    0.529
MXAN_1359
Conserved hypothetical protein; Identified by similarity to GB:CAB59490.1.
  
    0.407
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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