Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0387Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165. (284 aa)    
Predicted Functional Partners:
MXAN_1619
Conserved hypothetical protein; Identified by similarity to GB:AAN30633.1; match to protein family HMM PF08220.
 
     0.611
MXAN_0386
Identified by match to protein family HMM PF00903.
 
     0.599
MXAN_4992
Putative transcriptional regulator; Identified by match to protein family HMM PF08220.
 
     0.585
MXAN_3658
Conserved hypothetical protein; Identified by similarity to GB:CAE29453.1; match to protein family HMM PF08220.
 
     0.552
MXAN_2553
Conserved hypothetical protein; Identified by similarity to GB:CAE27706.1; match to protein family HMM PF08220.
 
     0.549
MXAN_6252
Identified by match to protein family HMM PF00903.
 
    0.526
MXAN_1359
Conserved hypothetical protein; Identified by similarity to GB:CAB59490.1.
 
     0.407
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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