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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0441Putative membrane protein. (989 aa)    
Predicted Functional Partners:
MXAN_0442
Putative lipoprotein.
       0.625
MXAN_3744
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.612
MXAN_7039
Putative lipoprotein.
  
     0.607
MXAN_7464
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.589
MXAN_0440
Putative membrane protein.
 
    
0.586
MXAN_7466
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.530
MXAN_0510
Putative cell wall surface anchor family protein.
  
     0.518
MXAN_0439
Erp domain protein; Identified by similarity to GB:AAK82956.1.
       0.512
MXAN_0536
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.449
MXAN_2323
Outer membrane protein, OMP85 family; Identified by match to protein family HMM PF01103.
  
    0.431
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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