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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0450Identified by match to protein family HMM PF01066; match to protein family HMM PF04138; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (411 aa)    
Predicted Functional Partners:
MXAN_0451
Identified by match to protein family HMM PF01569.
 
  
 0.945
MXAN_0452
Putative myo-inositol-1-phosphate synthase; Identified by match to protein family HMM PF01658; match to protein family HMM PF07994.
 
   
 0.920
MXAN_0448
Dual specificity phosphatase; Identified by match to protein family HMM PF00782.
 
 
 0.903
MXAN_1438
Putative competence/damage-inducible protein CinA; Identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; Belongs to the CinA family.
  
  
 0.775
MXAN_0449
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
MXAN_7464
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.713
MXAN_7466
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.696
MXAN_3349
DnaJ domain protein; Identified by match to protein family HMM PF00226.
  
   0.637
MXAN_3462
Polyketide synthase type I; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF02801.
 
 
 0.634
MXAN_0536
Hypothetical protein; Identified by Glimmer2; putative.
  
 
 
 0.597
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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