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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0569Hypothetical protein; Identified by Glimmer2; putative. (680 aa)    
Predicted Functional Partners:
MXAN_2445
Type III secretion system apparatus protein YscQ/HrcQ; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02551.
  
  
 0.986
MXAN_5649
Type III secretion system apparatus protein YscQ/HrcQ; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02551.
  
  
 0.986
MXAN_2109
Hyalin repeat protein; Identified by match to protein family HMM PF02494.
  
 
 0.930
MXAN_2444
Hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.912
MXAN_3879
Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.
  
  
 0.883
MXAN_2441
FliH family protein.
  
  
 0.879
MXAN_2442
ATPase, FliI/YscN family; Identified by similarity to SP:P23445; similarity to SP:P40290; match to protein family HMM PF00006; match to protein family HMM PF02874; match to protein family HMM TIGR01026; match to protein family HMM TIGR02546.
  
  
 0.879
fliQ
FliQ/MopD/SpaQ family protein; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
  
 
 0.853
MXAN_2449
FliR/MopE/SpaR family protein; Identified by similarity to SP:P35537; match to protein family HMM PF01311.
  
 
 0.853
MXAN_5646
Putative type III secretion system protein; Identified by similarity to SP:P35535; match to protein family HMM PF01313.
  
 
 0.853
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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