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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0597Glycine betaine/L-proline ABC transporter, permease and substrate-binding protein; Identified by match to protein family HMM PF00528; match to protein family HMM PF04069. (498 aa)    
Predicted Functional Partners:
MXAN_0596
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 0.999
MXAN_2251
Glycine betaine/L-proline ABC transporter,periplasmic substrate-binding protein; Identified by match to protein family HMM PF04069.
 
 
 0.766
proV
Glycine betaine/L-proline ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186.
  
 0.721
otsAB
Alpha,alpha-trehalose-phosphate synthase/trehalose-phosphatase; Identified by match to protein family HMM PF00982; match to protein family HMM PF02358; match to protein family HMM TIGR00685; match to protein family HMM TIGR01484.
  
  
 0.682
MXAN_0595
Putative lipoprotein.
       0.672
MXAN_6668
Conserved hypothetical protein; Identified by match to protein family HMM TIGR02271.
 
    0.669
MXAN_7473
Conserved hypothetical protein; Identified by similarity to GB:AAS02620.1.
 
     0.614
MXAN_2250
Glycine betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528.
 
  
0.609
MXAN_6666
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.596
MXAN_5503
Polar amino acid transport system substrate-binding protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.
     
 0.574
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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