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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0617Putative carbonic anhydrase; Identified by similarity to GB:AAR82947.1; match to protein family HMM PF00484. (213 aa)    
Predicted Functional Partners:
MXAN_4784
Inorganic anion transporter, sulfate permease (SulP) family; Identified by match to protein family HMM PF00860; match to protein family HMM PF00916.
 
 
 0.992
cynT
Carbonic anhydrase; Identified by similarity to SP:P17582; match to protein family HMM PF00484.
  
  
 
0.926
MXAN_0618
Identified by match to protein family HMM PF02733; match to protein family HMM PF02734.
       0.737
idnK
Thermosensitive gluconokinase; Identified by similarity to SP:P39208; match to protein family HMM PF01202; match to protein family HMM TIGR01313.
 
     0.577
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.571
MXAN_3783
Transferase hexapeptide repeat family protein; Identified by match to protein family HMM PF00132.
    
 
 0.562
MXAN_7120
Hypothetical protein; Identified by Glimmer2; putative.
    
 
 0.551
MXAN_0615
DNA ligase, ATP-dependent; Identified by similarity to SP:P44121; match to protein family HMM PF01068.
 
     0.467
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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