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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0633Identified by match to protein family HMM PF01381. (134 aa)    
Predicted Functional Partners:
MXAN_7127
FG-GAP repeat protein; Identified by match to protein family HMM PF01839.
  
     0.717
MXAN_4181
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.701
MXAN_0569
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.699
MXAN_1883
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.674
MXAN_0587
Trypsin domain protein; Belongs to the peptidase S1B family.
  
     0.654
MXAN_1848
Phage tail tape measure protein, TP901 family, core region; Identified by match to protein family HMM TIGR01760.
  
     0.642
MXAN_6352
Conserved domain protein; Identified by similarity to GB:CAE80420.1; match to protein family HMM PF04151; Belongs to the peptidase S1B family.
  
     0.639
MXAN_1864
N6 adenine-specific DNA methyltransferase; Identified by match to protein family HMM PF02086.
 
    0.637
MXAN_1022
Putative membrane protein.
  
     0.622
MXAN_7275
Conserved hypothetical protein.
  
     0.621
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.