close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0641Identified by match to protein family HMM PF03073. (189 aa)    
Predicted Functional Partners:
lolA
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
      
 0.821
phrB
Deoxyribodipyrimidine photolyase; Identified by similarity to SP:P12769; match to protein family HMM PF00875; match to protein family HMM PF03441; match to protein family HMM TIGR00591.
  
  
 0.663
MXAN_6199
Putative proline racemase; Identified by similarity to GB:AAF97423.1; match to protein family HMM PF05544; Belongs to the proline racemase family.
   
    0.565
MXAN_0640
Conserved hypothetical protein; Identified by match to protein family HMM PF06041.
       0.544
katE
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
    0.495
csgA
csgA protein; Identified by similarity to GB:AAA25391.2; match to protein family HMM PF00106; match to protein family HMM PF01370; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 0.465
MXAN_0898
Neurosporene hydroxylase; Identified by similarity to GB:CAA79959.1; match to protein family HMM PF07143.
  
    0.451
MXAN_6635
Monooxygenase, FAD-binding; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM PF03486.
 
    0.449
MXAN_4401
Identified by match to protein family HMM PF02274.
   
    0.442
MXAN_6903
Identified by match to protein family HMM PF02274.
   
    0.442
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
Server load: low (36%) [HD]