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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0664Conserved hypothetical protein. (235 aa)    
Predicted Functional Partners:
MXAN_6182
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
     0.702
MXAN_5689
Putative lipoprotein.
  
     0.686
MXAN_0666
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
    0.639
MXAN_0665
Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.
       0.586
MXAN_7106
Tat (twin-arginine translocation) pathway signal sequence domain protein; Identified by match to protein family HMM PF07586; match to protein family HMM TIGR01409.
  
     0.576
MXAN_3826
Conserved hypothetical protein; Identified by match to protein family HMM PF07626; match to protein family HMM PF07627; match to protein family HMM PF07631; match to protein family HMM PF07637.
  
     0.574
MXAN_4216
Tetratricopeptide repeat/ClpX C4-type zinc finger protein; Identified by match to protein family HMM PF06689; match to protein family HMM PF07719.
  
     0.568
MXAN_0667
Efflux transporter, AcrB/AcrD/AcrF family, inner membrane component; Identified by match to protein family HMM PF00873; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.567
MXAN_2320
Conserved hypothetical protein; Identified by similarity to GB:CAD76354.1.
  
     0.567
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
       0.548
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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