STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0690Putative lipoprotein. (514 aa)    
Predicted Functional Partners:
MXAN_1351
Conserved domain protein; Identified by similarity to GB:AAM29910.1; match to protein family HMM TIGR02276.
 
   0.512
MXAN_6213
Conserved hypothetical protein; Identified by match to protein family HMM TIGR02608.
  
    0.472
MXAN_2876
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.451
MXAN_3934
Identified by match to protein family HMM TIGR02814.
  
     0.445
MXAN_0712
Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF01590; match to protein family HMM PF02518.
 
 
 0.436
MXAN_3123
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.413
MXAN_3462
Polyketide synthase type I; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF02801.
 
  
 0.406
MXAN_5702
Conserved hypothetical protein; Identified by similarity to GB:BAB48671.1.
  
     0.401
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.