STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0721Heme ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01189. (252 aa)    
Predicted Functional Partners:
MXAN_0722
Putative membrane protein; Identified by match to protein family HMM PF01061.
 
  
 0.964
MXAN_6402
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
   
0.916
MXAN_0720
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF01590; match to protein family HMM PF02518.
       0.777
MXAN_0716
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
MXAN_0717
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
MXAN_0718
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
MXAN_0719
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
MXAN_0712
Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF01590; match to protein family HMM PF02518.
    
 0.664
MXAN_0713
Methyltransferase, CheR family; Identified by similarity to SP:P31105; match to protein family HMM PF01739; match to protein family HMM PF03705.
       0.601
MXAN_0714
Protein-glutamate methylesterase domain protein; Identified by match to protein family HMM PF01339.
  
    0.601
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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