Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0752WD domain G-beta repeat protein; Identified by match to protein family HMM PF00400. (547 aa)    
Predicted Functional Partners:
MXAN_3932
Polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00975; match to protein family HMM PF02801.
   
 0.790
MXAN_3792
WD domain G-beta repeat protein; Identified by match to protein family HMM PF00400.
  
     0.774
MXAN_0751
Conserved domain protein; Identified by similarity to GB:CAE81228.1.
       0.773
MXAN_5493
WD domain G-beta repeat protein; Identified by match to protein family HMM PF00400.
  
     0.750
MXAN_4959
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515.
  
 
  0.718
MXAN_4561
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.
  
 
  0.663
MXAN_1942
MJ0042 family finger-like domain/tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721; match to protein family HMM TIGR02098.
  
 
  0.615
MXAN_1948
TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.
  
 
  0.615
MXAN_1005
FG-GAP repeat protein; Identified by match to protein family HMM PF01839.
  
     0.612
MXAN_2284
Tetratricopeptide repeat protein.
  
 
  0.587
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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