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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0761Thioesterase-like protein; Identified by similarity to GB:AAN67921.1. (270 aa)    
Predicted Functional Partners:
MXAN_5897
Identified by match to protein family HMM PF01636.
 
  
 0.732
MXAN_5895
Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
  
 
 0.697
MXAN_4435
Conserved hypothetical protein; Identified by similarity to PIR:H70863; match to protein family HMM PF03435.
 
     0.693
MXAN_5898
Conserved hypothetical protein; Identified by similarity to PIR:G83416; match to protein family HMM PF00300.
  
    0.655
MXAN_3565
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.586
MXAN_1481
MaoC domain protein; Identified by match to protein family HMM PF01575.
  
 
 0.582
MXAN_5896
Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.580
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
       0.574
fadJ-2
Fatty oxidation complex, alpha subunit; Identified by similarity to SP:P77399; match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF01210; match to protein family HMM PF02737.
 
 
 0.546
MXAN_0374
Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.474
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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