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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0840Putative membrane protein; Identified by similarity to GB:AAN70784.1. (426 aa)    
Predicted Functional Partners:
MXAN_1645
Putative membrane protein; Identified by match to protein family HMM PF07947.
 
     0.740
MXAN_0841
Putative 8-amino-7-oxononanoate synthase; Identified by similarity to SP:P53556; match to protein family HMM PF00155; match to protein family HMM PF01053; match to protein family HMM PF01276.
   
 
 0.669
MXAN_0837
Formyltransferase; Identified by match to protein family HMM PF00551.
       0.634
MXAN_0838
Hypothetical protein; Identified by Glimmer2; putative.
       0.634
MXAN_0839
Hypothetical protein; Identified by Glimmer2; putative.
       0.634
MXAN_3932
Polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00975; match to protein family HMM PF02801.
  
 
 0.517
MXAN_5864
Putative membrane protein.
   
 
 0.494
carF
Carotenoid synthesis regulator CarF; Identified by similarity to GB:AAO22861.1.
  
     0.481
MXAN_4435
Conserved hypothetical protein; Identified by similarity to PIR:H70863; match to protein family HMM PF03435.
  
    0.472
MXAN_7348
Conserved hypothetical protein.
  
     0.459
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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