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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0841Putative 8-amino-7-oxononanoate synthase; Identified by similarity to SP:P53556; match to protein family HMM PF00155; match to protein family HMM PF01053; match to protein family HMM PF01276. (434 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
 0.939
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
 0.934
MXAN_2571
Aminotransferase, class II; Identified by match to protein family HMM PF00155; match to protein family HMM PF00202.
  
  
 
0.924
MXAN_1432
L-allo-threonine aldolase; Identified by similarity to SP:O07051.
    
 0.911
MXAN_4593
Hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.911
MXAN_0256
Aminotransferase, class V; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212.
    
 0.910
MXAN_3963
Sarcosine oxidase, beta subunit family protein; Identified by match to protein family HMM PF01266; match to protein family HMM PF04324.
  
 
 0.906
MXAN_7068
Conserved hypothetical protein.
   
 
 0.902
MXAN_3962
Pyridine nucleotide-disulphide oxidoreductase; Identified by match to protein family HMM PF07992.
   
 
 0.901
MXAN_6869
Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.901
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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