STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crtIPhytoene desaturase; Identified by similarity to SP:Q02861; match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02734. (517 aa)    
Predicted Functional Partners:
crtB
Phytoene synthetase; Identified by similarity to GB:CAA79957.1; match to protein family HMM PF00494.
 
 
 0.999
MXAN_0898
Neurosporene hydroxylase; Identified by similarity to GB:CAA79959.1; match to protein family HMM PF07143.
 
 
 0.990
MXAN_0900
Putative membrane protein.
    
 0.980
MXAN_4052
Putative phytoene dehydrogenase; Identified by similarity to SP:P21685.
  
  
0.923
carC
Phytoene dehydrogenase; Identified by similarity to SP:Q02861; match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM PF07992; match to protein family HMM TIGR02734.
  
  
0.923
crtE
Geranylgeranyl diphosphate synthase; Identified by similarity to GB:BAA82613.1; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.
  
  
 0.849
MXAN_0902
Acyltransferase domain protein; Identified by match to protein family HMM PF01553.
 
   
 0.840
MXAN_0894
Putative farnesyltranstransferase; Identified by similarity to GB:CAA79955.1; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.
  
  
 0.804
MXAN_0897
Hydroxyneurosporene dehydrogenase; Identified by similarity to GB:CAA79958.1; match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02734.
 
   
0.746
MXAN_0904
B12 binding domain/transcriptional regulator, MerR family; Identified by similarity to PIR:S68198; match to protein family HMM PF00376; match to protein family HMM PF02310.
 
  
 0.728
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.