close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0900Putative membrane protein. (128 aa)    
Predicted Functional Partners:
crtI
Phytoene desaturase; Identified by similarity to SP:Q02861; match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02734.
    
 0.980
MXAN_0898
Neurosporene hydroxylase; Identified by similarity to GB:CAA79959.1; match to protein family HMM PF07143.
    
  0.976
MXAN_4052
Putative phytoene dehydrogenase; Identified by similarity to SP:P21685.
    
  0.902
MXAN_6049
Fatty acid desaturase family protein; Identified by match to protein family HMM PF00487.
     
  0.900
MXAN_6958
Fatty acid desaturase family protein; Identified by match to protein family HMM PF00487.
     
  0.900
carC
Phytoene dehydrogenase; Identified by similarity to SP:Q02861; match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM PF07992; match to protein family HMM TIGR02734.
     
  0.900
crtB
Phytoene synthetase; Identified by similarity to GB:CAA79957.1; match to protein family HMM PF00494.
     
 0.819
MXAN_0901
Conserved hypothetical protein; Identified by similarity to PIR:S68195.
       0.793
MXAN_0897
Hydroxyneurosporene dehydrogenase; Identified by similarity to GB:CAA79958.1; match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02734.
       0.773
MXAN_0899
Putative carotenoid biosynthesis protein; Identified by similarity to GB:CAA79960.1.
       0.773
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
Server load: medium (80%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.