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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0923Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (260 aa)    
Predicted Functional Partners:
MXAN_6398
Putative 3-oxoacyl-acyl carrier protein reductase; Identified by similarity to SP:P25716; match to protein family HMM PF00106.
  
 
   0.544
MXAN_6877
Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106.
  
 
   0.531
MXAN_4370
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
  
 
   0.523
MXAN_0922
Putative lipoprotein.
       0.507
MXAN_0211
Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106.
  
 
   0.483
MXAN_6159
Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
  
 
   0.472
MXAN_3779
Non-ribosomal peptide synthetase/polyketide synthase; Identified by similarity to GB:AAF15891.2; match to protein family HMM PF00109; match to protein family HMM PF00296; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801; match to protein family HMM TIGR01733.
  
 
 0.451
MXAN_3462
Polyketide synthase type I; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF02801.
  
 
 0.444
MXAN_0915
Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106.
 
 
  
0.406
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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