Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MXAN_0957 | sbcC | MXAN_0957 | MXAN_0959 | Hypothetical protein; Identified by Glimmer2; putative. | Nuclease SbcCD, C subunit; Identified by similarity to SP:P13458. | 0.494 |
MXAN_0957 | sbcD | MXAN_0957 | MXAN_0958 | Hypothetical protein; Identified by Glimmer2; putative. | Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.494 |
sbcC | MXAN_0957 | MXAN_0959 | MXAN_0957 | Nuclease SbcCD, C subunit; Identified by similarity to SP:P13458. | Hypothetical protein; Identified by Glimmer2; putative. | 0.494 |
sbcC | sbcD | MXAN_0959 | MXAN_0958 | Nuclease SbcCD, C subunit; Identified by similarity to SP:P13458. | Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.995 |
sbcD | MXAN_0957 | MXAN_0958 | MXAN_0957 | Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.494 |
sbcD | sbcC | MXAN_0958 | MXAN_0959 | Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | Nuclease SbcCD, C subunit; Identified by similarity to SP:P13458. | 0.995 |