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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0964Peptidase, M14 family; Identified by match to protein family HMM PF00246. (591 aa)    
Predicted Functional Partners:
MXAN_0965
Conserved hypothetical protein; Identified by similarity to GB:AAS41196.1.
       0.675
MXAN_2922
Bacterial sugar transferase; Identified by match to protein family HMM PF02397; match to protein family HMM PF02629.
   
    0.637
MXAN_3774
Conserved hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
     0.596
MXAN_0870
Conserved hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
    0.588
MXAN_2631
Peptidase, M28 (aminopeptidase S) family; Identified by match to protein family HMM PF01546; match to protein family HMM PF04389.
  
     0.574
MXAN_1682
Peptidase, S9B (dipeptidyl peptidase IV) subfamily; Identified by similarity to GB:BAA11872.1; match to protein family HMM PF00326; match to protein family HMM PF00930.
 
    0.563
MXAN_6601
Peptidase, S9C (acylaminoacyl-peptidase) subfamily; Identified by match to protein family HMM PF00326; match to protein family HMM PF07676.
  
     0.546
MXAN_3581
Identified by match to protein family HMM PF01401.
  
     0.536
dpp4
Dipeptidyl peptidase IV; Identified by similarity to GB:BAA11872.1; match to protein family HMM PF00326; match to protein family HMM PF00930.
 
    0.487
MXAN_1449
Putative TonB protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
     0.485
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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