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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0995ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. (351 aa)    
Predicted Functional Partners:
MXAN_7115
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 0.967
MXAN_0771
Iron ABC transporter, permease protein; Identified by similarity to SP:P21409; match to protein family HMM PF00528.
 
 0.934
MXAN_0770
Iron ABC transporter, periplasmic iron-binding protein; Identified by similarity to SP:P17940; match to protein family HMM PF01547.
 
 
 0.914
MXAN_0772
Iron ABC transporter, ATP-binding protein; Identified by similarity to GB:AAS81608.1; match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
  
  
 
0.914
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.914
MXAN_4665
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
 
    
0.907
MXAN_7114
ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF01547.
 
 0.907
cysT
Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
    0.873
cysW
Sulfate ABC transporter, permease protein CysW; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140.
  
 0.796
MXAN_5378
Putative sugar ABC transporter, permease protein/periplasmic sugar-binding protein; Identified by similarity to SP:P26467; match to protein family HMM PF00528; match to protein family HMM PF01547.
 
   
 0.695
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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