close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_1017Prepilin-type N-terminal cleavage/methylation domain protein; Proteins containing this domain include type 4 pilus biogenesis components, competence proteins, and type II secretion system proteins; identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. (214 aa)    
Predicted Functional Partners:
MXAN_1019
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.885
MXAN_1020
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.859
MXAN_1018
Prepilin-type N-terminal cleavage/methylation domain protein; Proteins containing this domain include type 4 pilus biogenesis components, competence proteins, and type II secretion system proteins; identified by match to protein family HMM TIGR02532.
  
  
 0.852
MXAN_1021
Conserved hypothetical protein.
  
  
 0.728
MXAN_1016
Identified by match to protein family HMM PF00034.
       0.519
pilA
Pilin; Makes up the pili which are long filamentous (less than 10 nm thick and up to 10 um long) polarly located appendages. They are required for social (S) motility; Belongs to the N-Me-Phe pilin family.
  
  
 0.471
MXAN_1367
Prepilin-type N-terminal cleavage/methylation domain protein; Proteins containing this domain include type 4 pilus biogenesis components, competence proteins, and type II secretion system proteins; identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532.
  
  
 0.425
MXAN_1015
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.424
MXAN_0360
Type 4 pilus biogenesis operon protein; Identified by match to protein family HMM TIGR02532.
  
  
 0.423
MXAN_0364
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.400
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.